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Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS) - Phase II

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PCOR - CDRN Co-Investigator (PI: Ken Mandl) Leveraging an informatics infrastructure that our investigators have developed over the past 15 years, the Department of Biomedical Informatics (DBMI) at Harvard Medical School will work across 10 healthcare...

PCORI CDRN: Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS) - Phase II

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PCORI - CDRN Co-Investigator PI: Kenneth Mandl Leveraging an informatics infrastructure that our investigators have developed over the past 15 years, the Department of Biomedical Informatics (DBMI) at Harvard Medical School will work across 10 healthcare...

Access to data through PIC-SURE

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Tables I and II below list the open-access and restricted-access research datasets hosted by the Avillach Lab. Table III includes past projects that are now archived. Table I: Open Access Datasets hosted by the Avillach Lab Instance URL PIC-SURE Demo Site...

Real-world data reveal a diagnostic gap in non-alcoholic fatty liver disease

Journal Article

BACKGROUND: Non-alcoholic fatty liver disease (NAFLD) is the most common cause of liver disease worldwide. It affects an estimated 20% of the general population, based on cohort studies of varying size and heterogeneous selection. However, the prevalence...

Interagency Personnel Agreement with Veteran's Administration

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Veteran's Administration PI ($20K) To advise the VA administration in the creation of a clinical and genomic data warehouse.

Evaluating the scalability of packaged open source biomedical informatics applications across cloud based providers

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NIH Commons Funds PI ($50K)

Evaluating the scalability of packaged open source biomedical informatics applications across cloud based providers - Phase II

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NIH Commons Funds PI ($49K)

Autism Pilot

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BCH internally-funded Gene partnership / Research Connection Co-Investigator ($800k) (PI: Isaac Kohane) Creating a comprehensive autism clinical and genomic database using an i2b2-based research platform: tranSMART

Count Everything

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NIH BD2K Admin Supplement 3U54HG008540 Co-Investigator (PI: Haussler / Kohane / Ohno-Machado) Integrate BD2K RESTful clinical API with GH4GH Genomic RESTful API

2016-02 PRESENTATION/VIDEO - NIH BD2K PIC-SURE Supplements 1) NCATS GRDR, 2) Pittsburg CCD & 3) Count Everything

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NIH BD2K PIC-SURE Supplements 1) NCATS GRDR, 2) Pittsburg CCD & 3) Count Everything

Delineating autism subtypes by phenotype-wide scan across genome-wide genotypes in a patient-centric information commons

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Nancy Lurie Marks Foundation PI ($100k) This grant is for a one-year study that would result in a phenome-wide scan across all genotypes measured by SNP array. This will likely generate novel insights about the substructure of the different autisms.

NHLBI Cure Sickle Cell Initiative

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The Cure Sickle Cell Initiative is a collaborative, patient-focused research effort designed to accelerate promising genetic therapies to cure sickle cell disease. The Initiative considers non-traditional ways to advance research and brings together the...