Publications
100 results
100 results
2023
Ahalt S, Avillach P, Boyles R, Bradford K, Cox S, Davis-Dusenbery B, Grossman RL, Krishnamurthy A, Manning A, Paten B, Philippakis A, Borecki I, Chen SH, Kaltman J, Ladwa S, Schwartz C, Thomson A, Davis S, Leaf A, Lyons J, Sheets E, Bis JC, Conomos M, Culotti A, Desain T, Digiovanna J, Domazet M, Gogarten S, Gutiérrez-Sacristán A, Harris T, Heavner B, Jain D, O’Connor B, Osborn K, Pillion D, Pleiness J, Rice K, Rupp G, Serret-Larmande A, Smith A, Stedman JP, Stilp A, Barsanti T, Cheadle J, Erdmann C, Farlow B, Gartland-Gray A, Hayes J, Hiles H, Kerr P, Lenhardt C, Madden T, Mieczkowska JO, Miller A, Patton P, Rathbun M, Suber S, Asare J. Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research.
Journal of the American Medical Informatics Association : JAMIA. 2023;30(7):1293–1300. PMID: 37192819
Ahalt S, Avillach P, Boyles R, Bradford K, Cox S, Davis-Dusenbery B, Grossman RL, Krishnamurthy A, Manning A, Paten B, Philippakis A, Borecki I, Chen SH, Kaltman J, Ladwa S, Schwartz C, Thomson A, Davis S, Leaf A, Lyons J, Sheets E, Bis JC, Conomos M, Culotti A, Desain T, Digiovanna J, Domazet M, Gogarten S, Gutiérrez-Sacristán A, Harris T, Heavner B, Jain D, O’Connor B, Osborn K, Pillion D, Pleiness J, Rice K, Rupp G, Serret-Larmande A, Smith A, Stedman JP, Stilp A, Barsanti T, Cheadle J, Erdmann C, Farlow B, Gartland-Gray A, Hayes J, Hiles H, Kerr P, Lenhardt C, Madden T, Mieczkowska JO, Miller A, Patton P, Rathbun M, Suber S, Asare J. Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research.
Journal of the American Medical Informatics Association : JAMIA. 2023;30(7):1293–1300. PMID: 37192819
Zhang HG, Honerlaw JP, Maripuri M, Samayamuthu MJ, Beaulieu-Jones BR, Baig HS, L’Yi S, Ho YL, Morris M, Panickan VA, Wang X, Weber GM, Liao KP, Visweswaran S, Tan BWQ, Yuan W, Gehlenborg N, Muralidhar S, Ramoni RB, EHR C for CC of C 19 by, Kohane IS, Xia Z, Cho K, Cai T, Brat GA. Potential pitfalls in the use of real-world data for studying long COVID.
Nature medicine. 2023;29(5):1040–1043. PMID: 37055567
Zhang HG, Honerlaw JP, Maripuri M, Samayamuthu MJ, Beaulieu-Jones BR, Baig HS, L’Yi S, Ho YL, Morris M, Panickan VA, Wang X, Weber GM, Liao KP, Visweswaran S, Tan BWQ, Yuan W, Gehlenborg N, Muralidhar S, Ramoni RB, EHR C for CC of C 19 by, Kohane IS, Xia Z, Cho K, Cai T, Brat GA. Potential pitfalls in the use of real-world data for studying long COVID.
Nature medicine. 2023;29(5):1040–1043. PMID: 37055567
Tan ALM, Getzen EJ, Hutch MR, Strasser ZH, Gutiérrez-Sacristán A, Le TT, Dagliati A, Morris M, Hanauer DA, Moal B, Bonzel CL, Yuan W, Chiudinelli L, Das P, Zhang HG, Aronow BJ, Avillach P, Brat GA, Cai T, Hong C, La Cava WG, Loh HHW, Luo Y, Murphy SN, Hgiam KY, Omenn GS, Patel LP, Samayamuthu MJ, Shriver ER, Abad ZSH, Tan BWL, Visweswaran S, Wang X, Weber GM, Xia Z, Verdy B, EHR C 19 by, Long Q, Mowery DL, Holmes JH. Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?
Journal of biomedical informatics. 2023;139:104306. PMID: 36738870
Tan ALM, Getzen EJ, Hutch MR, Strasser ZH, Gutiérrez-Sacristán A, Le TT, Dagliati A, Morris M, Hanauer DA, Moal B, Bonzel CL, Yuan W, Chiudinelli L, Das P, Zhang HG, Aronow BJ, Avillach P, Brat GA, Cai T, Hong C, La Cava WG, Loh HHW, Luo Y, Murphy SN, Hgiam KY, Omenn GS, Patel LP, Samayamuthu MJ, Shriver ER, Abad ZSH, Tan BWL, Visweswaran S, Wang X, Weber GM, Xia Z, Verdy B, EHR C 19 by, Long Q, Mowery DL, Holmes JH. Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?
Journal of biomedical informatics. 2023;139:104306. PMID: 36738870
Tan BWL, Tan BWQ, Tan ALM, Schriver ER, Gutiérrez-Sacristán A, Das P, Yuan W, Hutch MR, Barrio NG, Jimenez MP, Abu-El-Rub N, Morris M, Moal B, Verdy G, Cho K, Ho YL, Patel LP, Dagliati A, Neuraz A, Klann JG, South AM, Visweswaran S, Hanauer DA, Maidlow SE, Liu M, Mowery DL, Batugo A, Makoudjou A, Tippmann P, Zöller D, Brat GA, Luo Y, Avillach P, Bellazzi R, Chiovato L, Malovini A, Tibollo V, Samayamuthu MJ, Balazote PS, Xia Z, Loh NHW, Chiudinelli L, Bonzel CL, Hong C, Zhang HG, Weber GM, Kohane IS, Cai T, Omenn GS, Holmes JH, Ngiam KY, EHR C for CC of C 19 by. Long-term kidney function recovery and mortality after COVID-19-associated acute kidney injury: An international multi-centre observational cohort study.
EClinicalMedicine. 2023;55:101724. PMID: 36381999
Tan BWL, Tan BWQ, Tan ALM, Schriver ER, Gutiérrez-Sacristán A, Das P, Yuan W, Hutch MR, Barrio NG, Jimenez MP, Abu-El-Rub N, Morris M, Moal B, Verdy G, Cho K, Ho YL, Patel LP, Dagliati A, Neuraz A, Klann JG, South AM, Visweswaran S, Hanauer DA, Maidlow SE, Liu M, Mowery DL, Batugo A, Makoudjou A, Tippmann P, Zöller D, Brat GA, Luo Y, Avillach P, Bellazzi R, Chiovato L, Malovini A, Tibollo V, Samayamuthu MJ, Balazote PS, Xia Z, Loh NHW, Chiudinelli L, Bonzel CL, Hong C, Zhang HG, Weber GM, Kohane IS, Cai T, Omenn GS, Holmes JH, Ngiam KY, EHR C for CC of C 19 by. Long-term kidney function recovery and mortality after COVID-19-associated acute kidney injury: An international multi-centre observational cohort study.
EClinicalMedicine. 2023;55:101724. PMID: 36381999
Moal B, Orieux A, Ferté T, Neuraz A, Brat GA, Avillach P, Bonzel CL, Cai T, Cho K, Cossin S, Griffier R, Hanauer DA, Haverkamp C, Ho YL, Hong C, Hutch MR, Klann JG, Le TT, Loh NHW, Luo Y, Makoudjou A, Morris M, Mowery DL, Olson KL, Patel LP, Samayamuthu MJ, Vidorreta FJS, Schriver ER, Schubert P, Verdy G, Visweswaran S, Wang X, Weber GM, Xia Z, Yuan W, Zhang HG, Zöller D, Kohane IS, EHR C for CC of C 19 by, Boyer A, Jouhet V. Acute respiratory distress syndrome after SARS-CoV-2 infection on young adult population: International observational federated study based on electronic health records through the 4CE consortium.
PloS one. 2023;18(1):e0266985. PMID: 36598895
Moal B, Orieux A, Ferté T, Neuraz A, Brat GA, Avillach P, Bonzel CL, Cai T, Cho K, Cossin S, Griffier R, Hanauer DA, Haverkamp C, Ho YL, Hong C, Hutch MR, Klann JG, Le TT, Loh NHW, Luo Y, Makoudjou A, Morris M, Mowery DL, Olson KL, Patel LP, Samayamuthu MJ, Vidorreta FJS, Schriver ER, Schubert P, Verdy G, Visweswaran S, Wang X, Weber GM, Xia Z, Yuan W, Zhang HG, Zöller D, Kohane IS, EHR C for CC of C 19 by, Boyer A, Jouhet V. Acute respiratory distress syndrome after SARS-CoV-2 infection on young adult population: International observational federated study based on electronic health records through the 4CE consortium.
PloS one. 2023;18(1):e0266985. PMID: 36598895
Moal B, Orieux A, Ferté T, Neuraz A, Brat GA, Avillach P, Bonzel CL, Cai T, Cho K, Cossin S, Griffier R, Hanauer DA, Haverkamp C, Ho YL, Hong C, Hutch MR, Klann JG, Le TT, Loh NHW, Luo Y, Makoudjou A, Morris M, Mowery DL, Olson KL, Patel LP, Samayamuthu MJ, Vidorreta FJS, Schriver ER, Schubert P, Verdy G, Visweswaran S, Wang X, Weber GM, Xia Z, Yuan W, Zhang HG, Zöller D, Kohane IS, EHR C for CC of C 19 by, Boyer A, Jouhet V. Acute respiratory distress syndrome after SARS-CoV-2 infection on young adult population: International observational federated study based on electronic health records through the 4CE consortium.
PloS one. 2023;18(1):e0266985. PMID: 36598895
Moal B, Orieux A, Ferté T, Neuraz A, Brat GA, Avillach P, Bonzel CL, Cai T, Cho K, Cossin S, Griffier R, Hanauer DA, Haverkamp C, Ho YL, Hong C, Hutch MR, Klann JG, Le TT, Loh NHW, Luo Y, Makoudjou A, Morris M, Mowery DL, Olson KL, Patel LP, Samayamuthu MJ, Vidorreta FJS, Schriver ER, Schubert P, Verdy G, Visweswaran S, Wang X, Weber GM, Xia Z, Yuan W, Zhang HG, Zöller D, Kohane IS, EHR C for CC of C 19 by, Boyer A, Jouhet V. Acute respiratory distress syndrome after SARS-CoV-2 infection on young adult population: International observational federated study based on electronic health records through the 4CE consortium.
PloS one. 2023;18(1):e0266985. PMID: 36598895
2022
Gutiérrez-Sacristán A, Serret-Larmande A, Hutch MR, Saez C, Aronow BJ, Bhatnagar S, Bonzel CL, Cai T, Devkota B, Hanauer DA, Loh NHW, Luo Y, Moal B, Ahooyi TM, Njoroge WFM, Omenn GS, Sanchez-Pinto N, South AM, Sperotto F, Tan ALM, Taylor DM, Verdy G, Visweswaran S, Xia Z, Zahner J, Avillach P, Bourgeois FT, EHR C for CC of C 19 by. Hospitalizations Associated With Mental Health Conditions Among Adolescents in the US and France During the COVID-19 Pandemic.
JAMA network open. 2022;5(12):e2246548. PMID: 36512353
Gutiérrez-Sacristán A, Serret-Larmande A, Hutch MR, Saez C, Aronow BJ, Bhatnagar S, Bonzel CL, Cai T, Devkota B, Hanauer DA, Loh NHW, Luo Y, Moal B, Ahooyi TM, Njoroge WFM, Omenn GS, Sanchez-Pinto N, South AM, Sperotto F, Tan ALM, Taylor DM, Verdy G, Visweswaran S, Xia Z, Zahner J, Avillach P, Bourgeois FT, EHR C for CC of C 19 by. Hospitalizations Associated With Mental Health Conditions Among Adolescents in the US and France During the COVID-19 Pandemic.
JAMA network open. 2022;5(12):e2246548. PMID: 36512353
Wang X, Zhang HG, Xiong X, Hong C, Weber GM, Brat GA, Bonzel CL, Luo Y, Duan R, Palmer NP, Hutch MR, Gutiérrez-Sacristán A, Bellazzi R, Chiovato L, Cho K, Dagliati A, Estiri H, García-Barrio N, Griffier R, Hanauer DA, Ho YL, Holmes JH, Keller MS, MEng JGK, L’Yi S, Lozano-Zahonero S, Maidlow SE, Makoudjou A, Malovini A, Moal B, Moore JH, Morris M, Mowery DL, Murphy SN, Neuraz A, Ngiam KY, Omenn GS, Patel LP, Pedrera-Jiménez M, Prunotto A, Samayamuthu MJ, Vidorreta FJS, Schriver ER, Schubert P, Serrano-Balazote P, South AM, Tan ALM, Tan BWL, Tibollo V, Tippmann P, Visweswaran S, Xia Z, Yuan W, Zöller D, Kohane IS, Avillach P, Guo Z, Cai T, 4CE C for CC of C 19 by E. SurvMaximin: Robust federated approach to transporting survival risk prediction models.
Journal of biomedical informatics. 2022;134:104176. PMID: 36007785
Wang X, Zhang HG, Xiong X, Hong C, Weber GM, Brat GA, Bonzel CL, Luo Y, Duan R, Palmer NP, Hutch MR, Gutiérrez-Sacristán A, Bellazzi R, Chiovato L, Cho K, Dagliati A, Estiri H, García-Barrio N, Griffier R, Hanauer DA, Ho YL, Holmes JH, Keller MS, MEng JGK, L’Yi S, Lozano-Zahonero S, Maidlow SE, Makoudjou A, Malovini A, Moal B, Moore JH, Morris M, Mowery DL, Murphy SN, Neuraz A, Ngiam KY, Omenn GS, Patel LP, Pedrera-Jiménez M, Prunotto A, Samayamuthu MJ, Vidorreta FJS, Schriver ER, Schubert P, Serrano-Balazote P, South AM, Tan ALM, Tan BWL, Tibollo V, Tippmann P, Visweswaran S, Xia Z, Yuan W, Zöller D, Kohane IS, Avillach P, Guo Z, Cai T, 4CE C for CC of C 19 by E. SurvMaximin: Robust federated approach to transporting survival risk prediction models.
Journal of biomedical informatics. 2022;134:104176. PMID: 36007785
Serret-Larmande A, Kaltman J, Avillach P. Streamlining statistical reproducibility: NHLBI ORCHID clinical trial results reproduction.
JAMIA Open. 2022;5(1).
Serret-Larmande A, Kaltman J, Avillach P. Streamlining statistical reproducibility: NHLBI ORCHID clinical trial results reproduction.
JAMIA Open. 2022;5(1).
2021
Bourgeois F, Gutiérrez-Sacristán, Keller M, Liu, Hong, Bonzel C, Tan A, Aronow B, Boeker, Booth, Cruz R, Devkota, García Barrio, Geva, Hanauer D, Hutch M, Issitt R, Klann J, Luo, Mandl K, Mao, Moal, Moshal K, Murphy S, Neuraz, Ngiam K, Omenn G, Patel L, Jiménez M, Sebire N, Balazote P, Serret-Larmande, South A, Spiridou, Taylor, Tippmann, Visweswaran, Weber G, Kohane I, Cai, Avillach. International Analysis of Electronic Health Records of Children and Youth Hospitalized With COVID-19 Infection in 6 Countries.
JAMA Network Open. 2021;
Bourgeois F, Gutiérrez-Sacristán, Keller M, Liu, Hong, Bonzel C, Tan A, Aronow B, Boeker, Booth, Cruz R, Devkota, García Barrio, Geva, Hanauer D, Hutch M, Issitt R, Klann J, Luo, Mandl K, Mao, Moal, Moshal K, Murphy S, Neuraz, Ngiam K, Omenn G, Patel L, Jiménez M, Sebire N, Balazote P, Serret-Larmande, South A, Spiridou, Taylor, Tippmann, Visweswaran, Weber G, Kohane I, Cai, Avillach. International Analysis of Electronic Health Records of Children and Youth Hospitalized With COVID-19 Infection in 6 Countries.
JAMA Network Open. 2021;
Feroe A, Uppal, Gutiérrez-Sacristán, Mousavi, Greenspun, Surati, Kohane I, Avillach. Medication Use in the Management of Comorbidities Among Individuals With Autism Spectrum Disorder From a Large Nationwide Insurance Database.
JAMA Pediatrics. 2021;
Feroe A, Uppal, Gutiérrez-Sacristán, Mousavi, Greenspun, Surati, Kohane I, Avillach. Medication Use in the Management of Comorbidities Among Individuals With Autism Spectrum Disorder From a Large Nationwide Insurance Database.
JAMA Pediatrics. 2021;
2020
Rubinstein YR, Robinson PN, Gahl WA, Avillach P, Baynam G, Cederroth H, Goodwin RM, Groft SC, Hansson MG, Harris NL, Huser V, Mascalzoni D, McMurry JA, Might M, Nellaker C, Mons B, Paltoo DN, Pevsner J, Posada M, Rockett-Frase AP, Roos M, Rubinstein TB, Taruscio D, van Enckevort E, Haendel MA. The case for open science: rare diseases.
JAMIA open. 2020;3(3):472–486. PMID: 33426479
Rubinstein YR, Robinson PN, Gahl WA, Avillach P, Baynam G, Cederroth H, Goodwin RM, Groft SC, Hansson MG, Harris NL, Huser V, Mascalzoni D, McMurry JA, Might M, Nellaker C, Mons B, Paltoo DN, Pevsner J, Posada M, Rockett-Frase AP, Roos M, Rubinstein TB, Taruscio D, van Enckevort E, Haendel MA. The case for open science: rare diseases.
JAMIA open. 2020;3(3):472–486. PMID: 33426479